Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 MTDHP2-201ENST00000601468 714 ntBASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3AQ9NNX9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 AL354751.1-201ENST00000412768 1863 ntBASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3AQ9NNX9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3AQ9NNX9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 BX664725.1-201ENST00000438252 379 ntBASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 AL691432.2-201ENST00000607222 2038 ntBASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VCX3AQ9NNX9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 BICD1-207ENST00000551848 1962 ntBASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VCX3AQ9NNX9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms