Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK4Q9HAZ1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK4Q9HAZ1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK4Q9HAZ1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 HLA-G-202ENST00000376815 851 ntBASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 HLA-G-203ENST00000376818 1127 ntBASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 AL390719.1-204ENST00000412397 1219 ntBASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 AC005829.2-201ENST00000571422 1056 ntBASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK4Q9HAZ1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLK4Q9HAZ1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms