Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC006557.6-201ENST00000623071 864 ntBASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 TERF1P1-201ENST00000311003 1181 ntBASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 MCRIP2P1-201ENST00000394346 511 ntBASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 AC116562.4-201ENST00000641316 2276 ntBASIC29.12■■■□□ 2.25
SCAF1Q9H7N4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 AC112907.3-201ENST00000577781 2400 ntBASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
SCAF1Q9H7N4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 LTB4R2-202ENST00000528054 3092 ntBASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 DUT-205ENST00000558813 769 ntTSL 2 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 WWOX-216ENST00000569818 525 ntBASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 LINC01568-207ENST00000641790 1380 ntBASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SCAF1Q9H7N4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 KRT18P68-201ENST00000392293 1000 ntBASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
SCAF1Q9H7N4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 AC104076.2-201ENST00000448912 469 ntBASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC29.08■■■□□ 2.25
SCAF1Q9H7N4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC29.08■■■□□ 2.24
SCAF1Q9H7N4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 SAPCD2P4-201ENST00000424595 1171 ntBASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
SCAF1Q9H7N4 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC29.07■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms