Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 FAM87A-204ENST00000613235 858 ntBASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 KRT8P8-201ENST00000434750 1448 ntBASIC22.65■■□□□ 1.22
RPAP3Q9H6T3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP3Q9H6T3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP3Q9H6T3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP3Q9H6T3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP3Q9H6T3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 ATP5G1P1-201ENST00000448724 379 ntBASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 AC128688.1-201ENST00000487626 519 ntBASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
RPAP3Q9H6T3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 MFAP1P1-201ENST00000442257 1255 ntBASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 FAM207BP-201ENST00000447172 505 ntBASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 AC006011.2-201ENST00000621313 1158 ntBASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 AC020907.5-201ENST00000624372 1936 ntBASIC22.63■■□□□ 1.21
RPAP3Q9H6T3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 AC091390.4-202ENST00000476426 537 ntBASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 Z85996.1-201ENST00000494644 937 ntBASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 NTF6B-201ENST00000591913 560 ntBASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 AC007375.3-201ENST00000600936 2314 ntBASIC22.62■■□□□ 1.21
RPAP3Q9H6T3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 AC096733.2-201ENST00000609937 1394 ntBASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP3Q9H6T3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP3Q9H6T3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP3Q9H6T3 AP001271.2-201ENST00000624018 1556 ntBASIC22.6■■□□□ 1.21
RPAP3Q9H6T3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms