Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 KRT8P17-201ENST00000453110 1448 ntBASIC18.72■□□□□ 0.59
PIF1Q9H611 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.72■□□□□ 0.59
PIF1Q9H611 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.72■□□□□ 0.59
PIF1Q9H611 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.71■□□□□ 0.59
PIF1Q9H611 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.71■□□□□ 0.59
PIF1Q9H611 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.71■□□□□ 0.59
PIF1Q9H611 KRT18P11-201ENST00000435214 1283 ntBASIC18.71■□□□□ 0.59
PIF1Q9H611 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.71■□□□□ 0.59
PIF1Q9H611 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.71■□□□□ 0.59
PIF1Q9H611 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIF1Q9H611 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
PIF1Q9H611 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PIF1Q9H611 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.7■□□□□ 0.58
PIF1Q9H611 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.7■□□□□ 0.58
PIF1Q9H611 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.7■□□□□ 0.58
PIF1Q9H611 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.7■□□□□ 0.58
PIF1Q9H611 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.7■□□□□ 0.58
PIF1Q9H611 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.7■□□□□ 0.58
PIF1Q9H611 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.7■□□□□ 0.58
PIF1Q9H611 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.7■□□□□ 0.58
PIF1Q9H611 AL162430.1-201ENST00000480705 870 ntBASIC18.7■□□□□ 0.58
PIF1Q9H611 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.7■□□□□ 0.58
PIF1Q9H611 AL591742.1-201ENST00000604433 565 ntBASIC18.7■□□□□ 0.58
PIF1Q9H611 AC016405.3-201ENST00000607710 860 ntBASIC18.7■□□□□ 0.58
PIF1Q9H611 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.7■□□□□ 0.58
PIF1Q9H611 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PIF1Q9H611 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.7■□□□□ 0.58
PIF1Q9H611 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIF1Q9H611 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PIF1Q9H611 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PIF1Q9H611 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PIF1Q9H611 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.69■□□□□ 0.58
PIF1Q9H611 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PIF1Q9H611 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PIF1Q9H611 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.69■□□□□ 0.58
PIF1Q9H611 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.69■□□□□ 0.58
PIF1Q9H611 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.69■□□□□ 0.58
PIF1Q9H611 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.69■□□□□ 0.58
PIF1Q9H611 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PIF1Q9H611 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PIF1Q9H611 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIF1Q9H611 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PIF1Q9H611 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PIF1Q9H611 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.68■□□□□ 0.58
PIF1Q9H611 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
PIF1Q9H611 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PIF1Q9H611 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PIF1Q9H611 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.68■□□□□ 0.58
PIF1Q9H611 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms