Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NXF3Q9H4D5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NXF3Q9H4D5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NXF3Q9H4D5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 MIR1238-201ENST00000408483 83 ntBASIC21.23■□□□□ 0.99
NXF3Q9H4D5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 AC026271.3-201ENST00000571884 352 ntBASIC21.23■□□□□ 0.99
NXF3Q9H4D5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 AC097493.4-201ENST00000641197 219 ntBASIC21.23■□□□□ 0.99
NXF3Q9H4D5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NXF3Q9H4D5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NXF3Q9H4D5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 KRT8P8-201ENST00000434750 1448 ntBASIC21.21■□□□□ 0.99
NXF3Q9H4D5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NXF3Q9H4D5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 B3GAT3P1-201ENST00000471720 806 ntBASIC21.2■□□□□ 0.98
NXF3Q9H4D5 AC011506.1-201ENST00000474329 610 ntBASIC21.2■□□□□ 0.98
NXF3Q9H4D5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 MIR6786-201ENST00000616843 113 ntBASIC21.2■□□□□ 0.98
NXF3Q9H4D5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.2■□□□□ 0.98
NXF3Q9H4D5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF3Q9H4D5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms