Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 AC055733.4-201ENST00000638462 1354 ntBASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFAF3Q9BU61 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 NOC2LP2-201ENST00000407594 1944 ntBASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 AC020907.5-201ENST00000624372 1936 ntBASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.1■□□□□ 0.01
NDUFAF3Q9BU61 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 AL513477.1-201ENST00000602865 2407 ntBASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 MST1L-201ENST00000442552 2185 ntBASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 AC005224.4-201ENST00000583262 1652 ntBASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 AC004854.2-201ENST00000608450 1441 ntBASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 AL162377.1-201ENST00000618844 1793 ntBASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 KRT18P11-201ENST00000435214 1283 ntBASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 AC046158.3-201ENST00000624947 2558 ntBASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
NDUFAF3Q9BU61 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.08■□□□□ 0.01
NDUFAF3Q9BU61 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NDUFAF3Q9BU61 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
NDUFAF3Q9BU61 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NDUFAF3Q9BU61 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NDUFAF3Q9BU61 AP004607.4-201ENST00000530158 1459 ntBASIC15.08■□□□□ 0.01
NDUFAF3Q9BU61 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NDUFAF3Q9BU61 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms