Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC007322.1-201ENST00000426983 750 ntBASIC11.67□□□□□ -0.54
LIMD2Q9BT23 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 MFSD11-216ENST00000590393 1141 ntBASIC11.67□□□□□ -0.54
LIMD2Q9BT23 AC011767.1-201ENST00000617410 1153 ntBASIC11.67□□□□□ -0.54
LIMD2Q9BT23 CYP21A1P-202ENST00000354927 1481 ntBASIC11.67□□□□□ -0.54
LIMD2Q9BT23 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 PARL-206ENST00000435888 1098 ntTSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 RARRES2P4-201ENST00000514074 484 ntBASIC11.66□□□□□ -0.54
LIMD2Q9BT23 KRT18P61-201ENST00000585825 1298 ntBASIC11.66□□□□□ -0.54
LIMD2Q9BT23 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LIMD2Q9BT23 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 SMG8-203ENST00000578922 2178 ntBASIC11.65□□□□□ -0.54
LIMD2Q9BT23 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 AC006015.1-201ENST00000429970 570 ntBASIC11.65□□□□□ -0.54
LIMD2Q9BT23 VMO1-204ENST00000441199 741 ntTSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 AL162430.1-201ENST00000480705 870 ntBASIC11.65□□□□□ -0.54
LIMD2Q9BT23 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 AL137784.2-201ENST00000607332 1000 ntBASIC11.65□□□□□ -0.54
LIMD2Q9BT23 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LIMD2Q9BT23 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms