Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 AL023875.1-201ENST00000640777 796 ntBASIC19.92■□□□□ 0.78
SEMA3CQ99985 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA3CQ99985 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SEMA3CQ99985 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SEMA3CQ99985 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA3CQ99985 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.91■□□□□ 0.78
SEMA3CQ99985 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3CQ99985 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
SEMA3CQ99985 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SEMA3CQ99985 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 KRASP1-201ENST00000407852 552 ntBASIC19.89■□□□□ 0.77
SEMA3CQ99985 AC239809.2-201ENST00000415381 517 ntBASIC19.89■□□□□ 0.77
SEMA3CQ99985 NBPF21P-201ENST00000425093 1451 ntBASIC19.89■□□□□ 0.77
SEMA3CQ99985 YBX1P10-201ENST00000444752 975 ntBASIC19.89■□□□□ 0.77
SEMA3CQ99985 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3CQ99985 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.89■□□□□ 0.77
SEMA3CQ99985 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3CQ99985 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3CQ99985 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3CQ99985 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA3CQ99985 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms