Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXC2Q99958 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXC2Q99958 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FOXC2Q99958 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FOXC2Q99958 PTBP1P-201ENST00000554374 1601 ntBASIC16.56■□□□□ 0.24
FOXC2Q99958 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXC2Q99958 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXC2Q99958 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXC2Q99958 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXC2Q99958 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXC2Q99958 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXC2Q99958 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXC2Q99958 TUBB8P6-201ENST00000436895 1288 ntBASIC16.55■□□□□ 0.24
FOXC2Q99958 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.55■□□□□ 0.24
FOXC2Q99958 AL359075.1-203ENST00000462729 1002 ntBASIC16.55■□□□□ 0.24
FOXC2Q99958 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXC2Q99958 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXC2Q99958 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.55■□□□□ 0.24
FOXC2Q99958 AL136038.3-201ENST00000561909 1096 ntBASIC16.55■□□□□ 0.24
FOXC2Q99958 AC008622.2-201ENST00000617006 1229 ntBASIC16.55■□□□□ 0.24
FOXC2Q99958 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXC2Q99958 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXC2Q99958 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FOXC2Q99958 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXC2Q99958 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
FOXC2Q99958 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 KRT18P16-201ENST00000510337 1294 ntBASIC16.54■□□□□ 0.24
FOXC2Q99958 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXC2Q99958 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXC2Q99958 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXC2Q99958 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
FOXC2Q99958 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FOXC2Q99958 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXC2Q99958 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXC2Q99958 AC138932.1-201ENST00000534164 6830 ntBASIC16.53■□□□□ 0.24
FOXC2Q99958 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.53■□□□□ 0.24
FOXC2Q99958 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXC2Q99958 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXC2Q99958 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXC2Q99958 VENTXP5-201ENST00000523979 775 ntBASIC16.53■□□□□ 0.24
FOXC2Q99958 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXC2Q99958 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXC2Q99958 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXC2Q99958 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXC2Q99958 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXC2Q99958 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXC2Q99958 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXC2Q99958 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXC2Q99958 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXC2Q99958 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
FOXC2Q99958 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXC2Q99958 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXC2Q99958 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms