Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NPAS2Q99743 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.18■□□□□ 0.66
NPAS2Q99743 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS2Q99743 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.18■□□□□ 0.66
NPAS2Q99743 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS2Q99743 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
NPAS2Q99743 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NPAS2Q99743 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NPAS2Q99743 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS2Q99743 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.17■□□□□ 0.66
NPAS2Q99743 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS2Q99743 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
NPAS2Q99743 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NPAS2Q99743 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.17■□□□□ 0.66
NPAS2Q99743 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS2Q99743 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.17■□□□□ 0.66
NPAS2Q99743 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NPAS2Q99743 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.17■□□□□ 0.66
NPAS2Q99743 AC092118.2-201ENST00000613495 667 ntBASIC19.17■□□□□ 0.66
NPAS2Q99743 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.17■□□□□ 0.66
NPAS2Q99743 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS2Q99743 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS2Q99743 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS2Q99743 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS2Q99743 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.17■□□□□ 0.66
NPAS2Q99743 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
NPAS2Q99743 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NPAS2Q99743 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS2Q99743 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS2Q99743 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NPAS2Q99743 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
NPAS2Q99743 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAS2Q99743 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAS2Q99743 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.16■□□□□ 0.66
NPAS2Q99743 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS2Q99743 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.16■□□□□ 0.66
NPAS2Q99743 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.16■□□□□ 0.66
NPAS2Q99743 FAM21FP-204ENST00000608637 956 ntBASIC19.16■□□□□ 0.66
NPAS2Q99743 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NPAS2Q99743 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS2Q99743 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS2Q99743 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NPAS2Q99743 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS2Q99743 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS2Q99743 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
NPAS2Q99743 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS2Q99743 NEFHP1-201ENST00000412845 2629 ntBASIC19.15■□□□□ 0.66
NPAS2Q99743 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.15■□□□□ 0.66
NPAS2Q99743 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS2Q99743 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS2Q99743 AC007322.3-201ENST00000426526 701 ntBASIC19.15■□□□□ 0.66
NPAS2Q99743 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.15■□□□□ 0.66
NPAS2Q99743 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.15■□□□□ 0.66
NPAS2Q99743 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.15■□□□□ 0.66
NPAS2Q99743 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.15■□□□□ 0.66
NPAS2Q99743 MIR4651-201ENST00000582622 73 ntBASIC19.15■□□□□ 0.66
NPAS2Q99743 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS2Q99743 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS2Q99743 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
NPAS2Q99743 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS2Q99743 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NPAS2Q99743 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPAS2Q99743 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPAS2Q99743 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPAS2Q99743 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
NPAS2Q99743 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.14■□□□□ 0.65
NPAS2Q99743 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 AL355472.2-201ENST00000422958 438 ntBASIC19.14■□□□□ 0.65
NPAS2Q99743 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.14■□□□□ 0.65
NPAS2Q99743 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS2Q99743 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.14■□□□□ 0.65
NPAS2Q99743 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NPAS2Q99743 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NPAS2Q99743 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms