Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSTQ99698 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSTQ99698 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LYSTQ99698 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSTQ99698 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSTQ99698 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.65□□□□□ -0.22
LYSTQ99698 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.65□□□□□ -0.22
LYSTQ99698 AL023803.3-201ENST00000615559 522 ntBASIC13.65□□□□□ -0.22
LYSTQ99698 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LYSTQ99698 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSTQ99698 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSTQ99698 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSTQ99698 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LYSTQ99698 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSTQ99698 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 AL117328.2-201ENST00000624617 1940 ntBASIC13.64□□□□□ -0.23
LYSTQ99698 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LYSTQ99698 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSTQ99698 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSTQ99698 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSTQ99698 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LYSTQ99698 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSTQ99698 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSTQ99698 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSTQ99698 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSTQ99698 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSTQ99698 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSTQ99698 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LYSTQ99698 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 AL390719.1-204ENST00000412397 1219 ntBASIC13.63□□□□□ -0.23
LYSTQ99698 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSTQ99698 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSTQ99698 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSTQ99698 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LYSTQ99698 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSTQ99698 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.63□□□□□ -0.23
LYSTQ99698 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LYSTQ99698 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.63□□□□□ -0.23
LYSTQ99698 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSTQ99698 SLC25A1P2-201ENST00000430693 912 ntBASIC13.63□□□□□ -0.23
LYSTQ99698 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
LYSTQ99698 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSTQ99698 AC007663.1-201ENST00000438948 1240 ntBASIC13.63□□□□□ -0.23
LYSTQ99698 AL732292.2-201ENST00000609649 430 ntBASIC13.63□□□□□ -0.23
LYSTQ99698 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSTQ99698 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSTQ99698 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSTQ99698 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSTQ99698 AC004980.1-204ENST00000429707 299 ntBASIC13.62□□□□□ -0.23
LYSTQ99698 SPDYE13P-201ENST00000445314 798 ntBASIC13.62□□□□□ -0.23
LYSTQ99698 UNC93B7-201ENST00000509439 705 ntBASIC13.62□□□□□ -0.23
LYSTQ99698 VENTXP5-201ENST00000523979 775 ntBASIC13.62□□□□□ -0.23
LYSTQ99698 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.62□□□□□ -0.23
LYSTQ99698 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LYSTQ99698 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LYSTQ99698 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSTQ99698 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSTQ99698 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSTQ99698 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSTQ99698 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSTQ99698 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSTQ99698 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSTQ99698 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms