Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 KRT18P11-201ENST00000435214 1283 ntBASIC18.63■□□□□ 0.57
CGREF1Q99674 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.63■□□□□ 0.57
CGREF1Q99674 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.63■□□□□ 0.57
CGREF1Q99674 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.63■□□□□ 0.57
CGREF1Q99674 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.63■□□□□ 0.57
CGREF1Q99674 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CGREF1Q99674 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGREF1Q99674 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CGREF1Q99674 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CGREF1Q99674 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGREF1Q99674 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CGREF1Q99674 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGREF1Q99674 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CGREF1Q99674 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGREF1Q99674 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.62■□□□□ 0.57
CGREF1Q99674 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CGREF1Q99674 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CGREF1Q99674 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CGREF1Q99674 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.61■□□□□ 0.57
CGREF1Q99674 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CGREF1Q99674 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.61■□□□□ 0.57
CGREF1Q99674 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CGREF1Q99674 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.61■□□□□ 0.57
CGREF1Q99674 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGREF1Q99674 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CGREF1Q99674 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 AC068338.2-201ENST00000563278 1430 ntBASIC18.6■□□□□ 0.57
CGREF1Q99674 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.6■□□□□ 0.57
CGREF1Q99674 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.6■□□□□ 0.57
CGREF1Q99674 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.6■□□□□ 0.57
CGREF1Q99674 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.6■□□□□ 0.57
CGREF1Q99674 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.6■□□□□ 0.57
CGREF1Q99674 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.6■□□□□ 0.57
CGREF1Q99674 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CGREF1Q99674 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.6■□□□□ 0.57
CGREF1Q99674 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.6■□□□□ 0.57
CGREF1Q99674 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 AC020916.1-201ENST00000587762 1774 ntBASIC18.6■□□□□ 0.57
CGREF1Q99674 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CGREF1Q99674 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGREF1Q99674 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.6■□□□□ 0.57
CGREF1Q99674 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CGREF1Q99674 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGREF1Q99674 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.59■□□□□ 0.57
CGREF1Q99674 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CGREF1Q99674 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
CGREF1Q99674 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGREF1Q99674 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CGREF1Q99674 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGREF1Q99674 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGREF1Q99674 AL138781.2-201ENST00000617896 1843 ntBASIC18.59■□□□□ 0.57
CGREF1Q99674 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.59■□□□□ 0.57
CGREF1Q99674 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms