Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 DUSP5P1-201ENST00000441325 1139 ntBASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 AL671277.2-201ENST00000458060 996 ntBASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 AC093458.2-201ENST00000623150 629 ntBASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 PHGDH-210ENST00000641115 1638 ntBASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 AC005229.4-201ENST00000610085 2198 ntBASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 CA15P1-201ENST00000481698 905 ntBASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 DPP3P2-201ENST00000416030 1696 ntBASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN4Q96NY8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 AC026396.1-201ENST00000419388 421 ntBASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 AC008622.2-201ENST00000617006 1229 ntBASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN4Q96NY8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.35■□□□□ 0.85
NECTIN4Q96NY8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 HCG4P8-203ENST00000443049 980 ntBASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 AC116407.4-201ENST00000623319 1061 ntBASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN4Q96NY8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.33■□□□□ 0.85
NECTIN4Q96NY8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NECTIN4Q96NY8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
NECTIN4Q96NY8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms