Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 AC005332.1-201ENST00000577698 1310 ntBASIC19.89■□□□□ 0.77
SHDQ96IW2 AC005229.4-201ENST00000610085 2198 ntBASIC19.89■□□□□ 0.77
SHDQ96IW2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
SHDQ96IW2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.89■□□□□ 0.77
SHDQ96IW2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.89■□□□□ 0.77
SHDQ96IW2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.88■□□□□ 0.77
SHDQ96IW2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.88■□□□□ 0.77
SHDQ96IW2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.88■□□□□ 0.77
SHDQ96IW2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.88■□□□□ 0.77
SHDQ96IW2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.88■□□□□ 0.77
SHDQ96IW2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SHDQ96IW2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SHDQ96IW2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHDQ96IW2 AC133561.1-201ENST00000568600 2415 ntBASIC19.87■□□□□ 0.77
SHDQ96IW2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
SHDQ96IW2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHDQ96IW2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHDQ96IW2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SHDQ96IW2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHDQ96IW2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.87■□□□□ 0.77
SHDQ96IW2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHDQ96IW2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.87■□□□□ 0.77
SHDQ96IW2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.87■□□□□ 0.77
SHDQ96IW2 PRSS44-201ENST00000515154 1146 ntBASIC19.87■□□□□ 0.77
SHDQ96IW2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.87■□□□□ 0.77
SHDQ96IW2 CLEC4GP1-201ENST00000596555 870 ntBASIC19.87■□□□□ 0.77
SHDQ96IW2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHDQ96IW2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHDQ96IW2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHDQ96IW2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHDQ96IW2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SHDQ96IW2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHDQ96IW2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.86■□□□□ 0.77
SHDQ96IW2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 VENTXP5-201ENST00000523979 775 ntBASIC19.86■□□□□ 0.77
SHDQ96IW2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.86■□□□□ 0.77
SHDQ96IW2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 AL441883.1-201ENST00000566170 1045 ntBASIC19.86■□□□□ 0.77
SHDQ96IW2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.86■□□□□ 0.77
SHDQ96IW2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.86■□□□□ 0.77
SHDQ96IW2 AL023973.1-201ENST00000624619 620 ntBASIC19.86■□□□□ 0.77
SHDQ96IW2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHDQ96IW2 AL024507.2-201ENST00000606070 2574 ntBASIC19.86■□□□□ 0.77
SHDQ96IW2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SHDQ96IW2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SHDQ96IW2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.85■□□□□ 0.77
SHDQ96IW2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.85■□□□□ 0.77
SHDQ96IW2 Z85996.1-201ENST00000494644 937 ntBASIC19.85■□□□□ 0.77
SHDQ96IW2 AL136038.3-201ENST00000561909 1096 ntBASIC19.85■□□□□ 0.77
SHDQ96IW2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.85■□□□□ 0.77
SHDQ96IW2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHDQ96IW2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.85■□□□□ 0.77
SHDQ96IW2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.85■□□□□ 0.77
SHDQ96IW2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHDQ96IW2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.84■□□□□ 0.77
SHDQ96IW2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms