Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 AC096733.2-201ENST00000609937 1394 ntBASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 SLC25A1P2-201ENST00000430693 912 ntBASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 AC092647.4-201ENST00000457211 535 ntBASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 COX11P1-201ENST00000489116 835 ntBASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 KRT18P56-201ENST00000507275 550 ntBASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 HLA-A-209ENST00000638375 975 ntBASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRNP40Q96DI7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 AP000550.4-202ENST00000639755 178 ntBASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRNP40Q96DI7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 AC007663.1-201ENST00000438948 1240 ntBASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 AC010653.2-201ENST00000623505 997 ntBASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRNP40Q96DI7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNRNP40Q96DI7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNRNP40Q96DI7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNRNP40Q96DI7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
SNRNP40Q96DI7 PHGDH-210ENST00000641115 1638 ntBASIC17.66■□□□□ 0.42
SNRNP40Q96DI7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNRNP40Q96DI7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNRNP40Q96DI7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms