Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL26A1Q96A83 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.96■□□□□ 0.63
COL26A1Q96A83 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.96■□□□□ 0.63
COL26A1Q96A83 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL26A1Q96A83 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL26A1Q96A83 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
COL26A1Q96A83 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.96■□□□□ 0.63
COL26A1Q96A83 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL26A1Q96A83 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL26A1Q96A83 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 AC112907.3-201ENST00000577781 2400 ntBASIC18.95■□□□□ 0.62
COL26A1Q96A83 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 KRT8P20-201ENST00000423953 1409 ntBASIC18.95■□□□□ 0.62
COL26A1Q96A83 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 AC023511.2-201ENST00000618803 211 ntBASIC18.95■□□□□ 0.62
COL26A1Q96A83 AC092865.7-201ENST00000641832 219 ntBASIC18.95■□□□□ 0.62
COL26A1Q96A83 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.95■□□□□ 0.62
COL26A1Q96A83 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL26A1Q96A83 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL26A1Q96A83 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL26A1Q96A83 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 KRT18P56-201ENST00000507275 550 ntBASIC18.93■□□□□ 0.62
COL26A1Q96A83 RPPH1-201ENST00000516869 333 ntBASIC18.93■□□□□ 0.62
COL26A1Q96A83 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 AL031963.3-201ENST00000606441 850 ntBASIC18.93■□□□□ 0.62
COL26A1Q96A83 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL26A1Q96A83 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.93■□□□□ 0.62
COL26A1Q96A83 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 KRT8P17-201ENST00000453110 1448 ntBASIC18.92■□□□□ 0.62
COL26A1Q96A83 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
COL26A1Q96A83 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
COL26A1Q96A83 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL26A1Q96A83 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms