Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 LINC01023-201ENST00000606054 436 ntBASIC20.66■□□□□ 0.9
ATP2A3Q93084 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.66■□□□□ 0.9
ATP2A3Q93084 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 AC124283.5-201ENST00000624661 1809 ntBASIC20.66■□□□□ 0.9
ATP2A3Q93084 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP2A3Q93084 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ATP2A3Q93084 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 NBPF21P-201ENST00000425093 1451 ntBASIC20.65■□□□□ 0.9
ATP2A3Q93084 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP2A3Q93084 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A3Q93084 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.64■□□□□ 0.9
ATP2A3Q93084 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.64■□□□□ 0.9
ATP2A3Q93084 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP2A3Q93084 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 AL353807.1-201ENST00000427475 662 ntBASIC20.64■□□□□ 0.89
ATP2A3Q93084 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A3Q93084 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2A3Q93084 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A3Q93084 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2A3Q93084 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms