Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.39■□□□□ 0.69
USP7Q93009 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.39■□□□□ 0.69
USP7Q93009 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP7Q93009 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP7Q93009 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.39■□□□□ 0.69
USP7Q93009 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.39■□□□□ 0.69
USP7Q93009 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP7Q93009 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP7Q93009 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP7Q93009 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP7Q93009 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.38■□□□□ 0.69
USP7Q93009 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.38■□□□□ 0.69
USP7Q93009 AC239809.2-201ENST00000415381 517 ntBASIC19.38■□□□□ 0.69
USP7Q93009 AC012618.2-201ENST00000428058 849 ntBASIC19.38■□□□□ 0.69
USP7Q93009 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP7Q93009 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP7Q93009 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.38■□□□□ 0.69
USP7Q93009 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.38■□□□□ 0.69
USP7Q93009 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.38■□□□□ 0.69
USP7Q93009 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.38■□□□□ 0.69
USP7Q93009 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP7Q93009 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.38■□□□□ 0.69
USP7Q93009 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP7Q93009 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP7Q93009 AC233702.5-201ENST00000584107 538 ntBASIC19.38■□□□□ 0.69
USP7Q93009 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
USP7Q93009 AL691432.2-201ENST00000607222 2038 ntBASIC19.38■□□□□ 0.69
USP7Q93009 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP7Q93009 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP7Q93009 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.38■□□□□ 0.69
USP7Q93009 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP7Q93009 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.37■□□□□ 0.69
USP7Q93009 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
USP7Q93009 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.37■□□□□ 0.69
USP7Q93009 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP7Q93009 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
USP7Q93009 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP7Q93009 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.37■□□□□ 0.69
USP7Q93009 AL390719.1-204ENST00000412397 1219 ntBASIC19.37■□□□□ 0.69
USP7Q93009 TSPY7P-201ENST00000431358 1114 ntBASIC19.37■□□□□ 0.69
USP7Q93009 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.37■□□□□ 0.69
USP7Q93009 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP7Q93009 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.37■□□□□ 0.69
USP7Q93009 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
USP7Q93009 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.37■□□□□ 0.69
USP7Q93009 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
USP7Q93009 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
USP7Q93009 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 AC125437.2-201ENST00000625180 2167 ntBASIC19.36■□□□□ 0.69
USP7Q93009 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.36■□□□□ 0.69
USP7Q93009 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 AC133681.1-201ENST00000465482 601 ntBASIC19.36■□□□□ 0.69
USP7Q93009 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.36■□□□□ 0.69
USP7Q93009 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.36■□□□□ 0.69
USP7Q93009 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.36■□□□□ 0.69
USP7Q93009 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP7Q93009 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
USP7Q93009 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
USP7Q93009 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
USP7Q93009 RNF165-205ENST00000588679 2904 ntBASIC19.35■□□□□ 0.69
USP7Q93009 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.35■□□□□ 0.69
USP7Q93009 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.35■□□□□ 0.69
USP7Q93009 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
USP7Q93009 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.35■□□□□ 0.69
USP7Q93009 KRASP1-201ENST00000407852 552 ntBASIC19.35■□□□□ 0.69
USP7Q93009 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.35■□□□□ 0.69
USP7Q93009 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.35■□□□□ 0.69
USP7Q93009 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 AC110285.5-201ENST00000611501 352 ntBASIC19.35■□□□□ 0.69
USP7Q93009 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
USP7Q93009 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
USP7Q93009 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
USP7Q93009 PTBP1P-201ENST00000554374 1601 ntBASIC19.35■□□□□ 0.69
USP7Q93009 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.35■□□□□ 0.69
USP7Q93009 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
USP7Q93009 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms