Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 AC092597.1-201ENST00000487352 616 ntBASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 AC140113.3-201ENST00000605663 199 ntBASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 AP002414.4-201ENST00000589764 1148 ntBASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.29□□□□□ -0.28
ALMS1Q8TCU4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 AL121603.2-201ENST00000557373 2117 ntBASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 TSPY12P-201ENST00000421279 868 ntBASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 AL031432.5-201ENST00000641059 760 ntBASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.28□□□□□ -0.28
ALMS1Q8TCU4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.27□□□□□ -0.28
ALMS1Q8TCU4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 ZNF444P1-201ENST00000559497 298 ntBASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 SLC25A6P4-201ENST00000586535 553 ntBASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 STARP1-201ENST00000397973 869 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms