Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 Z99916.2-201ENST00000604037 246 ntBASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC9Q8TBE3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
FNDC9Q8TBE3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 AL162377.1-201ENST00000618844 1793 ntBASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 AC004264.1-201ENST00000608354 794 ntBASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC9Q8TBE3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 AP006587.1-201ENST00000534129 1502 ntBASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 TFP1-202ENST00000475455 1573 ntBASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 KRT16P5-201ENST00000455284 522 ntBASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.63■□□□□ 0.41
FNDC9Q8TBE3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 AC138932.1-201ENST00000534164 6830 ntBASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 RPS2P55-201ENST00000397318 883 ntBASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 AL596275.1-201ENST00000423464 877 ntBASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 AC012618.2-201ENST00000428058 849 ntBASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 AC107956.1-201ENST00000494359 873 ntBASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 RARRES2P10-201ENST00000564312 460 ntBASIC17.62■□□□□ 0.41
FNDC9Q8TBE3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms