Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 SLC25A1P2-201ENST00000430693 912 ntBASIC15.3■□□□□ 0.04
LINC01006Q8NI28 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 LINC00565-201ENST00000562710 2331 ntBASIC15.3■□□□□ 0.04
LINC01006Q8NI28 LINC01238-205ENST00000567549 1107 ntBASIC15.3■□□□□ 0.04
LINC01006Q8NI28 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01006Q8NI28 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 KRT8P8-201ENST00000434750 1448 ntBASIC15.29■□□□□ 0.04
LINC01006Q8NI28 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 AC091390.4-202ENST00000476426 537 ntBASIC15.29■□□□□ 0.04
LINC01006Q8NI28 AC063952.2-201ENST00000498792 1227 ntBASIC15.29■□□□□ 0.04
LINC01006Q8NI28 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 AC022616.7-201ENST00000525383 220 ntBASIC15.29■□□□□ 0.04
LINC01006Q8NI28 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01006Q8NI28 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 AC117947.1-201ENST00000427448 529 ntBASIC15.28■□□□□ 0.04
LINC01006Q8NI28 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms