Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 FAM201B-201ENST00000458407 597 ntBASIC17.17■□□□□ 0.34
CPEB3Q8NE35 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 AC233263.1-201ENST00000578059 224 ntBASIC17.16■□□□□ 0.34
CPEB3Q8NE35 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 AL121829.2-201ENST00000620908 328 ntBASIC17.16■□□□□ 0.34
CPEB3Q8NE35 AL121906.2-201ENST00000621597 723 ntBASIC17.16■□□□□ 0.34
CPEB3Q8NE35 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CPEB3Q8NE35 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 KRT17P3-201ENST00000420566 1262 ntBASIC17.15■□□□□ 0.34
CPEB3Q8NE35 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CPEB3Q8NE35 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.14■□□□□ 0.34
CPEB3Q8NE35 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPEB3Q8NE35 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPEB3Q8NE35 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 AC069544.1-201ENST00000609399 999 ntBASIC17.14■□□□□ 0.33
CPEB3Q8NE35 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms