Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 KRT18P16-201ENST00000510337 1294 ntBASIC15.93■□□□□ 0.14
LINC00311Q8N616 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LINC00311Q8N616 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00311Q8N616 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 KRT8P8-201ENST00000434750 1448 ntBASIC15.92■□□□□ 0.14
LINC00311Q8N616 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC00311Q8N616 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00311Q8N616 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 TUBB8P6-201ENST00000436895 1288 ntBASIC15.91■□□□□ 0.14
LINC00311Q8N616 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 AC069544.1-201ENST00000609399 999 ntBASIC15.91■□□□□ 0.14
LINC00311Q8N616 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00311Q8N616 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00311Q8N616 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
LINC00311Q8N616 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC00311Q8N616 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LINC00311Q8N616 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
LINC00311Q8N616 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00311Q8N616 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC00311Q8N616 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC00311Q8N616 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms