Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 AC004408.2-201ENST00000623613 2777 ntBASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 AC069236.1-201ENST00000604339 616 ntBASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 AL589743.5-201ENST00000616611 1050 ntBASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC01561Q8N1V8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LINC01561Q8N1V8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.15□□□□□ -0.31
LINC01561Q8N1V8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LINC01561Q8N1V8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 C2orf69P4-201ENST00000565394 541 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms