Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TSPY21P-201ENST00000433481 731 ntBASIC27.41■■□□□ 1.98
XRN1Q8IZH2 TSPY23P-201ENST00000440136 739 ntBASIC27.41■■□□□ 1.98
XRN1Q8IZH2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 FEM1AP4-201ENST00000443167 1987 ntBASIC27.4■■□□□ 1.98
XRN1Q8IZH2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
XRN1Q8IZH2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC27.39■■□□□ 1.98
XRN1Q8IZH2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
XRN1Q8IZH2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC27.39■■□□□ 1.98
XRN1Q8IZH2 ZNF444P1-201ENST00000559497 298 ntBASIC27.39■■□□□ 1.98
XRN1Q8IZH2 NPAP1P7-201ENST00000613027 823 ntBASIC27.39■■□□□ 1.98
XRN1Q8IZH2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
XRN1Q8IZH2 AC012676.1-201ENST00000574705 1949 ntBASIC27.39■■□□□ 1.98
XRN1Q8IZH2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC27.39■■□□□ 1.98
XRN1Q8IZH2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
XRN1Q8IZH2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC27.39■■□□□ 1.97
XRN1Q8IZH2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
XRN1Q8IZH2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
XRN1Q8IZH2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
XRN1Q8IZH2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 KRT8P41-201ENST00000533985 1514 ntBASIC27.38■■□□□ 1.97
XRN1Q8IZH2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 KRT8P45-201ENST00000414328 1447 ntBASIC27.38■■□□□ 1.97
XRN1Q8IZH2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 AL136038.3-201ENST00000561909 1096 ntBASIC27.38■■□□□ 1.97
XRN1Q8IZH2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
XRN1Q8IZH2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 ATP5G2P1-201ENST00000433580 426 ntBASIC27.37■■□□□ 1.97
XRN1Q8IZH2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 CKBP1-201ENST00000565489 1086 ntBASIC27.37■■□□□ 1.97
XRN1Q8IZH2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC27.37■■□□□ 1.97
XRN1Q8IZH2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 PRSS44-201ENST00000515154 1146 ntBASIC27.36■■□□□ 1.97
XRN1Q8IZH2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 BID-203ENST00000399765 1879 ntTSL 2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC27.36■■□□□ 1.97
XRN1Q8IZH2 FP700111.2-201ENST00000619190 1892 ntBASIC27.35■■□□□ 1.97
XRN1Q8IZH2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms