Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC146Q8IYE0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 TREX1-205ENST00000625293 1783 ntBASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC146Q8IYE0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC146Q8IYE0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC146Q8IYE0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26■■□□□ 1.75
CCDC146Q8IYE0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC26■■□□□ 1.75
CCDC146Q8IYE0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC146Q8IYE0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC146Q8IYE0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
CCDC146Q8IYE0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC146Q8IYE0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
CCDC146Q8IYE0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26■■□□□ 1.75
CCDC146Q8IYE0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
CCDC146Q8IYE0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC146Q8IYE0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26■■□□□ 1.75
CCDC146Q8IYE0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC146Q8IYE0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC146Q8IYE0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC146Q8IYE0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC146Q8IYE0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC146Q8IYE0 AC133681.1-201ENST00000465482 601 ntBASIC25.98■■□□□ 1.75
CCDC146Q8IYE0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CCDC146Q8IYE0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.98■■□□□ 1.75
CCDC146Q8IYE0 FAM197Y4-202ENST00000622692 608 ntBASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms