Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.67■□□□□ 0.9
SCUBE3Q8IX30 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.67■□□□□ 0.9
SCUBE3Q8IX30 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
SCUBE3Q8IX30 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCUBE3Q8IX30 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCUBE3Q8IX30 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SCUBE3Q8IX30 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCUBE3Q8IX30 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 RPPH1-201ENST00000516869 333 ntBASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 AC124016.1-201ENST00000609552 612 ntBASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 NBPF21P-201ENST00000425093 1451 ntBASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.66■□□□□ 0.9
SCUBE3Q8IX30 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 KRASP1-201ENST00000407852 552 ntBASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 AC239809.2-201ENST00000415381 517 ntBASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.65■□□□□ 0.9
SCUBE3Q8IX30 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCUBE3Q8IX30 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 AC098590.1-201ENST00000468126 897 ntBASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 AL158211.5-201ENST00000623583 2518 ntBASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCUBE3Q8IX30 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 AL359736.2-201ENST00000621992 437 ntBASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.63■□□□□ 0.89
SCUBE3Q8IX30 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms