Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DHX40Q8IX18 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.82■■□□□ 1.08
DHX40Q8IX18 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.82■■□□□ 1.08
DHX40Q8IX18 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.82■■□□□ 1.08
DHX40Q8IX18 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DHX40Q8IX18 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
DHX40Q8IX18 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 AC006015.1-201ENST00000429970 570 ntBASIC21.81■■□□□ 1.08
DHX40Q8IX18 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DHX40Q8IX18 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.81■■□□□ 1.08
DHX40Q8IX18 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 HLA-G-202ENST00000376815 851 ntBASIC21.8■■□□□ 1.08
DHX40Q8IX18 HLA-G-203ENST00000376818 1127 ntBASIC21.8■■□□□ 1.08
DHX40Q8IX18 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
DHX40Q8IX18 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHX40Q8IX18 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 AC006333.2-201ENST00000607957 2099 ntBASIC21.79■■□□□ 1.08
DHX40Q8IX18 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 AC007613.1-201ENST00000572811 2597 ntBASIC21.79■■□□□ 1.08
DHX40Q8IX18 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 CNN2P6-201ENST00000439038 900 ntBASIC21.79■■□□□ 1.08
DHX40Q8IX18 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 AC068338.2-201ENST00000563278 1430 ntBASIC21.79■■□□□ 1.08
DHX40Q8IX18 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
DHX40Q8IX18 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHX40Q8IX18 TEX21P-204ENST00000641479 1693 ntBASIC21.79■■□□□ 1.08
DHX40Q8IX18 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.78■■□□□ 1.08
DHX40Q8IX18 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.78■■□□□ 1.08
DHX40Q8IX18 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.78■■□□□ 1.08
DHX40Q8IX18 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.78■■□□□ 1.08
DHX40Q8IX18 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
DHX40Q8IX18 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
DHX40Q8IX18 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms