Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 AL390719.1-204ENST00000412397 1219 ntBASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 NCF1B-203ENST00000435988 1254 ntBASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 AC092118.2-201ENST00000613495 667 ntBASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00346Q8IVM7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 TSPY6P-201ENST00000448518 926 ntBASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 AC091874.3-201ENST00000512672 1195 ntBASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00346Q8IVM7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00346Q8IVM7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LINC00346Q8IVM7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LINC00346Q8IVM7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
LINC00346Q8IVM7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00346Q8IVM7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00346Q8IVM7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.33■□□□□ 0.37
LINC00346Q8IVM7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 AC092666.2-201ENST00000613287 246 ntBASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 AC006557.6-201ENST00000623071 864 ntBASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00346Q8IVM7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 AC124283.5-201ENST00000624661 1809 ntBASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms