Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 SMUG1P1-201ENST00000590640 811 ntBASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.77■□□□□ 0.44
CROCCP3Q8IVE0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CROCCP3Q8IVE0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 AC239859.2-201ENST00000444165 318 ntBASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 AC067852.2-201ENST00000590513 2313 ntBASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.76■□□□□ 0.43
CROCCP3Q8IVE0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 SRD5A1P1-201ENST00000442297 786 ntBASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 AP004607.4-201ENST00000530158 1459 ntBASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CROCCP3Q8IVE0 SYT6-210ENST00000641643 1587 ntBASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms