Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM90A1Q86YD7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FAM90A1Q86YD7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 YBX1P10-201ENST00000444752 975 ntBASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 AL023875.1-201ENST00000640777 796 ntBASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM90A1Q86YD7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 TREX1-205ENST00000625293 1783 ntBASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AC239809.2-201ENST00000415381 517 ntBASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AC125437.2-201ENST00000625180 2167 ntBASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 AP006587.1-201ENST00000534129 1502 ntBASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM90A1Q86YD7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM90A1Q86YD7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms