Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 AP005212.1-201ENST00000581547 1997 ntBASIC21.91■■□□□ 1.1
TRIM50Q86XT4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 AC010331.1-201ENST00000611423 582 ntBASIC21.91■■□□□ 1.1
TRIM50Q86XT4 AL031985.4-201ENST00000642138 673 ntBASIC21.91■■□□□ 1.1
TRIM50Q86XT4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 AC092667.1-201ENST00000434301 2586 ntBASIC21.9■■□□□ 1.1
TRIM50Q86XT4 AC004980.1-204ENST00000429707 299 ntBASIC21.9■■□□□ 1.1
TRIM50Q86XT4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM50Q86XT4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM50Q86XT4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM50Q86XT4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 FITM1-202ENST00000559294 800 ntBASIC21.89■■□□□ 1.09
TRIM50Q86XT4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM50Q86XT4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 TMEM179-206ENST00000616017 1645 ntBASIC21.88■■□□□ 1.09
TRIM50Q86XT4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 AC011506.1-201ENST00000474329 610 ntBASIC21.88■■□□□ 1.09
TRIM50Q86XT4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 RN7SL850P-201ENST00000579959 291 ntBASIC21.88■■□□□ 1.09
TRIM50Q86XT4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 AC145285.6-201ENST00000604632 637 ntBASIC21.88■■□□□ 1.09
TRIM50Q86XT4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM50Q86XT4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 B3GAT3P1-201ENST00000471720 806 ntBASIC21.87■■□□□ 1.09
TRIM50Q86XT4 AC026271.3-201ENST00000571884 352 ntBASIC21.87■■□□□ 1.09
TRIM50Q86XT4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 AC010947.1-201ENST00000623454 693 ntBASIC21.87■■□□□ 1.09
TRIM50Q86XT4 HLA-A-209ENST00000638375 975 ntBASIC21.87■■□□□ 1.09
TRIM50Q86XT4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
TRIM50Q86XT4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms