Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 PLK5-205ENST00000642079 1969 ntBASIC13.71□□□□□ -0.21
CSMD3Q7Z407 AC018553.1-201ENST00000616682 1458 ntBASIC13.71□□□□□ -0.21
CSMD3Q7Z407 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 FBXW4P1-201ENST00000426721 2239 ntBASIC13.71□□□□□ -0.21
CSMD3Q7Z407 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 RN7SL510P-201ENST00000581311 263 ntBASIC13.71□□□□□ -0.21
CSMD3Q7Z407 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CSMD3Q7Z407 KRT8P45-201ENST00000414328 1447 ntBASIC13.71□□□□□ -0.22
CSMD3Q7Z407 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 LINC01465-201ENST00000408887 1940 ntBASIC13.71□□□□□ -0.22
CSMD3Q7Z407 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 TSPY17P-201ENST00000450329 467 ntBASIC13.71□□□□□ -0.22
CSMD3Q7Z407 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.71□□□□□ -0.22
CSMD3Q7Z407 NPAP1P7-201ENST00000613027 823 ntBASIC13.71□□□□□ -0.22
CSMD3Q7Z407 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 KRT8P17-201ENST00000453110 1448 ntBASIC13.7□□□□□ -0.22
CSMD3Q7Z407 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 AL512604.3-201ENST00000569583 964 ntBASIC13.7□□□□□ -0.22
CSMD3Q7Z407 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.7□□□□□ -0.22
CSMD3Q7Z407 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 WWC2-AS2-201ENST00000578387 2183 ntBASIC13.69□□□□□ -0.22
CSMD3Q7Z407 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 SPDYE15P-201ENST00000424157 909 ntBASIC13.69□□□□□ -0.22
CSMD3Q7Z407 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 AC012313.10-201ENST00000623509 926 ntBASIC13.69□□□□□ -0.22
CSMD3Q7Z407 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD3Q7Z407 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms