Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 CYP21A1P-202ENST00000354927 1481 ntBASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 PGM5P4-201ENST00000421970 445 ntBASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 KRT18P5-201ENST00000436075 1291 ntBASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 AL356652.1-201ENST00000615962 565 ntBASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 NEFHP1-201ENST00000412845 2629 ntBASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 LINC01465-201ENST00000408887 1940 ntBASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCHD4Q6ZW05 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 AC007322.4-201ENST00000509611 723 ntBASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 AC137761.2-201ENST00000561729 223 ntBASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 AC145350.3-201ENST00000569033 163 ntBASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 MFSD11-216ENST00000590393 1141 ntBASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCHD4Q6ZW05 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCHD4Q6ZW05 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PTCHD4Q6ZW05 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTCHD4Q6ZW05 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTCHD4Q6ZW05 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.02■□□□□ 0.47
PTCHD4Q6ZW05 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 KRT18P11-201ENST00000435214 1283 ntBASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 AC013268.1-206ENST00000638368 961 ntBASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 AC112229.1-201ENST00000639295 961 ntBASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PTCHD4Q6ZW05 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms