Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 SRD5A1P1-201ENST00000442297 786 ntBASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 AL161938.1-201ENST00000569833 2180 ntBASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINC00173Q6ZV60 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00173Q6ZV60 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LINC00173Q6ZV60 SYT6-210ENST00000641643 1587 ntBASIC14.21□□□□□ -0.14
LINC00173Q6ZV60 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
LINC00173Q6ZV60 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00173Q6ZV60 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 PRORSD1P-202ENST00000563365 2154 ntBASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00173Q6ZV60 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 SERBP1P1-201ENST00000396021 1160 ntBASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 KRT16P3-201ENST00000439127 1283 ntBASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 AL138724.1-201ENST00000606771 1088 ntBASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00173Q6ZV60 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00173Q6ZV60 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms