Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 AL359736.2-201ENST00000621992 437 ntBASIC18.37■□□□□ 0.53
RTL4Q6ZR62 AP006294.2-201ENST00000641667 209 ntBASIC18.37■□□□□ 0.53
RTL4Q6ZR62 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 DPP3P2-201ENST00000416030 1696 ntBASIC18.36■□□□□ 0.53
RTL4Q6ZR62 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 RPPH1-201ENST00000516869 333 ntBASIC18.36■□□□□ 0.53
RTL4Q6ZR62 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 FAM197Y4-202ENST00000622692 608 ntBASIC18.36■□□□□ 0.53
RTL4Q6ZR62 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL4Q6ZR62 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 KRT8P17-201ENST00000453110 1448 ntBASIC18.35■□□□□ 0.53
RTL4Q6ZR62 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 MTDHP1-201ENST00000605323 784 ntBASIC18.35■□□□□ 0.53
RTL4Q6ZR62 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL4Q6ZR62 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 UBE2SP1-201ENST00000450587 669 ntBASIC18.34■□□□□ 0.53
RTL4Q6ZR62 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 PRKY-204ENST00000533551 1019 ntBASIC18.34■□□□□ 0.53
RTL4Q6ZR62 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL4Q6ZR62 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms