Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CD109Q6YHK3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CD109Q6YHK3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC30.01■■■□□ 2.39
CD109Q6YHK3 AC009078.2-202ENST00000463353 338 ntBASIC30.01■■■□□ 2.39
CD109Q6YHK3 MIR3180-1-201ENST00000580374 94 ntBASIC30.01■■■□□ 2.39
CD109Q6YHK3 MIR3180-3-201ENST00000584616 94 ntBASIC30.01■■■□□ 2.39
CD109Q6YHK3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
CD109Q6YHK3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC30.01■■■□□ 2.39
CD109Q6YHK3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CD109Q6YHK3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CD109Q6YHK3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC30.01■■■□□ 2.39
CD109Q6YHK3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC30.01■■■□□ 2.39
CD109Q6YHK3 KRT16P6-202ENST00000425692 1426 ntBASIC30■■■□□ 2.39
CD109Q6YHK3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC30■■■□□ 2.39
CD109Q6YHK3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC30■■■□□ 2.39
CD109Q6YHK3 AL022342.1-201ENST00000400363 863 ntBASIC30■■■□□ 2.39
CD109Q6YHK3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC30■■■□□ 2.39
CD109Q6YHK3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC30■■■□□ 2.39
CD109Q6YHK3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC30■■■□□ 2.39
CD109Q6YHK3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
CD109Q6YHK3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30■■■□□ 2.39
CD109Q6YHK3 AC005229.4-201ENST00000610085 2198 ntBASIC30■■■□□ 2.39
CD109Q6YHK3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CD109Q6YHK3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CD109Q6YHK3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
CD109Q6YHK3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC29.99■■■□□ 2.39
CD109Q6YHK3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC29.99■■■□□ 2.39
CD109Q6YHK3 PHGDH-210ENST00000641115 1638 ntBASIC29.98■■■□□ 2.39
CD109Q6YHK3 HBZP1-201ENST00000354915 429 ntBASIC29.98■■■□□ 2.39
CD109Q6YHK3 AL645929.1-201ENST00000420084 975 ntBASIC29.98■■■□□ 2.39
CD109Q6YHK3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC29.98■■■□□ 2.39
CD109Q6YHK3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CD109Q6YHK3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
CD109Q6YHK3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CD109Q6YHK3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CD109Q6YHK3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CD109Q6YHK3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CD109Q6YHK3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CD109Q6YHK3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
CD109Q6YHK3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CD109Q6YHK3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CD109Q6YHK3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CD109Q6YHK3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CD109Q6YHK3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
CD109Q6YHK3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CD109Q6YHK3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC29.96■■■□□ 2.39
CD109Q6YHK3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC29.96■■■□□ 2.39
CD109Q6YHK3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC29.96■■■□□ 2.39
CD109Q6YHK3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC29.96■■■□□ 2.39
CD109Q6YHK3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC29.96■■■□□ 2.39
CD109Q6YHK3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CD109Q6YHK3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
CD109Q6YHK3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC29.95■■■□□ 2.38
CD109Q6YHK3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CD109Q6YHK3 IFNL4P1-201ENST00000607083 540 ntBASIC29.95■■■□□ 2.38
CD109Q6YHK3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC29.95■■■□□ 2.38
CD109Q6YHK3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.95■■■□□ 2.38
CD109Q6YHK3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
CD109Q6YHK3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC29.95■■■□□ 2.38
CD109Q6YHK3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CD109Q6YHK3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
CD109Q6YHK3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CD109Q6YHK3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CD109Q6YHK3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CD109Q6YHK3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CD109Q6YHK3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CD109Q6YHK3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CD109Q6YHK3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC29.94■■■□□ 2.38
CD109Q6YHK3 TMEM179-206ENST00000616017 1645 ntBASIC29.93■■■□□ 2.38
CD109Q6YHK3 DPP3P2-201ENST00000416030 1696 ntBASIC29.93■■■□□ 2.38
CD109Q6YHK3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CD109Q6YHK3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC29.93■■■□□ 2.38
CD109Q6YHK3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC29.93■■■□□ 2.38
CD109Q6YHK3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CD109Q6YHK3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms