Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 AF201337.1-201ENST00000520239 748 ntBASIC19.99■□□□□ 0.79
CASC4Q6P4E1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 MIR663A-201ENST00000385250 93 ntBASIC19.98■□□□□ 0.79
CASC4Q6P4E1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.98■□□□□ 0.79
CASC4Q6P4E1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 BX276092.2-201ENST00000417668 665 ntBASIC19.97■□□□□ 0.79
CASC4Q6P4E1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 CDCA4P2-201ENST00000441182 718 ntBASIC19.97■□□□□ 0.79
CASC4Q6P4E1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASC4Q6P4E1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 MIR935-201ENST00000401179 91 ntBASIC19.96■□□□□ 0.79
CASC4Q6P4E1 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.96■□□□□ 0.79
CASC4Q6P4E1 AC026185.1-201ENST00000445748 174 ntBASIC19.96■□□□□ 0.79
CASC4Q6P4E1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASC4Q6P4E1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms