Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 AL512408.1-201ENST00000569378 2000 ntBASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 FEM1AP1-201ENST00000431297 1995 ntBASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 UNC93B2-201ENST00000285383 730 ntBASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 RBM17P1-201ENST00000453646 1190 ntBASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 MIR6786-201ENST00000616843 113 ntBASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.69■□□□□ 0.26
ARFGEF3Q5TH69 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 AP001271.2-201ENST00000624018 1556 ntBASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 AC011506.1-201ENST00000474329 610 ntBASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARFGEF3Q5TH69 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 RCN1P1-201ENST00000400413 996 ntBASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 CR392000.1-201ENST00000624770 1228 ntBASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ARFGEF3Q5TH69 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms