Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 HBZP1-201ENST00000354915 429 ntBASIC10.83□□□□□ -0.68
UBR4Q5T4S7 AL162741.1-201ENST00000565563 1558 ntBASIC10.83□□□□□ -0.68
UBR4Q5T4S7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 STARP1-201ENST00000397973 869 ntBASIC10.83□□□□□ -0.68
UBR4Q5T4S7 AC190387.1-201ENST00000551683 408 ntBASIC10.83□□□□□ -0.68
UBR4Q5T4S7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 AC138932.3-201ENST00000567634 1902 ntBASIC10.83□□□□□ -0.68
UBR4Q5T4S7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC10.83□□□□□ -0.68
UBR4Q5T4S7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 AC138761.1-201ENST00000584393 385 ntBASIC10.82□□□□□ -0.68
UBR4Q5T4S7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC10.82□□□□□ -0.68
UBR4Q5T4S7 MIR7706-201ENST00000613747 67 ntBASIC10.82□□□□□ -0.68
UBR4Q5T4S7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 GAPDHP21-201ENST00000450301 1010 ntBASIC10.81□□□□□ -0.68
UBR4Q5T4S7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.81□□□□□ -0.68
UBR4Q5T4S7 AL121672.3-201ENST00000608644 468 ntBASIC10.81□□□□□ -0.68
UBR4Q5T4S7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 AC009065.1-201ENST00000564055 1225 ntBASIC10.81□□□□□ -0.68
UBR4Q5T4S7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 RASA4DP-201ENST00000460726 1199 ntBASIC10.81□□□□□ -0.68
UBR4Q5T4S7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 SIGLEC30P-201ENST00000455569 941 ntBASIC10.81□□□□□ -0.68
UBR4Q5T4S7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 TK1-205ENST00000590862 642 ntTSL 3 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC10.81□□□□□ -0.68
UBR4Q5T4S7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms