Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 AC026271.3-201ENST00000571884 352 ntBASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CTC1Q2NKJ3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21■□□□□ 0.95
CTC1Q2NKJ3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21■□□□□ 0.95
CTC1Q2NKJ3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 LINC01238-205ENST00000567549 1107 ntBASIC21■□□□□ 0.95
CTC1Q2NKJ3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21■□□□□ 0.95
CTC1Q2NKJ3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21■□□□□ 0.95
CTC1Q2NKJ3 DGCR10-201ENST00000609839 495 ntBASIC21■□□□□ 0.95
CTC1Q2NKJ3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21■□□□□ 0.95
CTC1Q2NKJ3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21■□□□□ 0.95
CTC1Q2NKJ3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTC1Q2NKJ3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 KRT126P-201ENST00000549467 1181 ntBASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 FAM87A-204ENST00000613235 858 ntBASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTC1Q2NKJ3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 FAM8A6P-201ENST00000407496 1135 ntBASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 AC091390.4-202ENST00000476426 537 ntBASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 AL445675.2-201ENST00000620291 557 ntBASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.98■□□□□ 0.95
CTC1Q2NKJ3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 AL121894.2-201ENST00000602977 491 ntBASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTC1Q2NKJ3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 AL031133.1-201ENST00000406807 723 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms