Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 AC104692.2-201ENST00000603054 253 ntBASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO4Q2I0M5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO4Q2I0M5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 FAM99A-202ENST00000538190 1989 ntBASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 YBX1P10-201ENST00000444752 975 ntBASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 KRT8P36-201ENST00000489121 1440 ntBASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RSPO4Q2I0M5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 STARP1-201ENST00000397973 869 ntBASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RSPO4Q2I0M5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 AP000523.1-201ENST00000398242 1049 ntBASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 TUBB8P6-201ENST00000436895 1288 ntBASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 AC092183.1-201ENST00000469884 875 ntBASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 AL671883.3-201ENST00000603274 991 ntBASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms