Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 AL390955.1-201ENST00000428694 934 ntBASIC23.6■■□□□ 1.37
PDS5AQ29RF7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 AP000692.2-201ENST00000608391 879 ntBASIC23.6■■□□□ 1.37
PDS5AQ29RF7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 AC010947.1-201ENST00000623454 693 ntBASIC23.6■■□□□ 1.37
PDS5AQ29RF7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PDS5AQ29RF7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.59■■□□□ 1.37
PDS5AQ29RF7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 AC099778.1-201ENST00000568593 1911 ntBASIC23.59■■□□□ 1.37
PDS5AQ29RF7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 AC004951.3-201ENST00000418645 1148 ntBASIC23.59■■□□□ 1.37
PDS5AQ29RF7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
PDS5AQ29RF7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 AC096733.2-201ENST00000609937 1394 ntBASIC23.58■■□□□ 1.37
PDS5AQ29RF7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 CYP2D8P-201ENST00000433633 1490 ntBASIC23.58■■□□□ 1.37
PDS5AQ29RF7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PDS5AQ29RF7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
PDS5AQ29RF7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.58■■□□□ 1.36
PDS5AQ29RF7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.58■■□□□ 1.36
PDS5AQ29RF7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.58■■□□□ 1.36
PDS5AQ29RF7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.58■■□□□ 1.36
PDS5AQ29RF7 NAPSB-206ENST00000562112 1266 ntBASIC23.58■■□□□ 1.36
PDS5AQ29RF7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PDS5AQ29RF7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 RCN1P1-201ENST00000400413 996 ntBASIC23.57■■□□□ 1.36
PDS5AQ29RF7 AC008040.2-201ENST00000461049 708 ntBASIC23.57■■□□□ 1.36
PDS5AQ29RF7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDS5AQ29RF7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PDS5AQ29RF7 AC011298.2-201ENST00000617989 482 ntBASIC23.56■■□□□ 1.36
PDS5AQ29RF7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 AL160286.2-201ENST00000567150 934 ntBASIC23.55■■□□□ 1.36
PDS5AQ29RF7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms