Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC1Q15915 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC1Q15915 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.85■□□□□ 0.61
ZIC1Q15915 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC1Q15915 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.85■□□□□ 0.61
ZIC1Q15915 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC1Q15915 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.85■□□□□ 0.61
ZIC1Q15915 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC1Q15915 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZIC1Q15915 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ZIC1Q15915 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.84■□□□□ 0.61
ZIC1Q15915 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 AL135905.2-201ENST00000584934 1404 ntBASIC18.84■□□□□ 0.61
ZIC1Q15915 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 MIR4497-201ENST00000583208 89 ntBASIC18.84■□□□□ 0.61
ZIC1Q15915 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.84■□□□□ 0.61
ZIC1Q15915 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC1Q15915 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ZIC1Q15915 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZIC1Q15915 AC125437.2-201ENST00000625180 2167 ntBASIC18.83■□□□□ 0.61
ZIC1Q15915 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZIC1Q15915 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZIC1Q15915 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZIC1Q15915 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZIC1Q15915 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZIC1Q15915 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.83■□□□□ 0.61
ZIC1Q15915 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZIC1Q15915 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.83■□□□□ 0.61
ZIC1Q15915 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.83■□□□□ 0.6
ZIC1Q15915 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ZIC1Q15915 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.83■□□□□ 0.6
ZIC1Q15915 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 TSPY7P-201ENST00000431358 1114 ntBASIC18.83■□□□□ 0.6
ZIC1Q15915 YBX1P10-201ENST00000444752 975 ntBASIC18.83■□□□□ 0.6
ZIC1Q15915 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.83■□□□□ 0.6
ZIC1Q15915 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ZIC1Q15915 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.83■□□□□ 0.6
ZIC1Q15915 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZIC1Q15915 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC1Q15915 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.83■□□□□ 0.6
ZIC1Q15915 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.82■□□□□ 0.6
ZIC1Q15915 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC1Q15915 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZIC1Q15915 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.82■□□□□ 0.6
ZIC1Q15915 KRT18P16-201ENST00000510337 1294 ntBASIC18.82■□□□□ 0.6
ZIC1Q15915 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.82■□□□□ 0.6
ZIC1Q15915 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.82■□□□□ 0.6
ZIC1Q15915 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.82■□□□□ 0.6
ZIC1Q15915 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
ZIC1Q15915 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC1Q15915 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZIC1Q15915 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC1Q15915 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC1Q15915 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ZIC1Q15915 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.81■□□□□ 0.6
ZIC1Q15915 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.81■□□□□ 0.6
ZIC1Q15915 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.81■□□□□ 0.6
ZIC1Q15915 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC1Q15915 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms