Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL356652.1-201ENST00000615962 565 ntBASIC13.87□□□□□ -0.19
RPL39P62891 AC106739.1-201ENST00000617035 715 ntBASIC13.87□□□□□ -0.19
RPL39P62891 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL39P62891 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.87□□□□□ -0.19
RPL39P62891 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
RPL39P62891 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL39P62891 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 AC018470.1-201ENST00000624790 3129 ntBASIC13.87□□□□□ -0.19
RPL39P62891 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.87□□□□□ -0.19
RPL39P62891 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL39P62891 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL39P62891 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RPL39P62891 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RPL39P62891 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.86□□□□□ -0.19
RPL39P62891 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.86□□□□□ -0.19
RPL39P62891 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.86□□□□□ -0.19
RPL39P62891 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.86□□□□□ -0.19
RPL39P62891 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.86□□□□□ -0.19
RPL39P62891 CCDC92B-201ENST00000575506 885 ntBASIC13.86□□□□□ -0.19
RPL39P62891 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
RPL39P62891 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 CROCCP3-202ENST00000420820 1947 ntBASIC13.86□□□□□ -0.19
RPL39P62891 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL39P62891 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RPL39P62891 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RPL39P62891 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.85□□□□□ -0.19
RPL39P62891 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RPL39P62891 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.85□□□□□ -0.19
RPL39P62891 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.85□□□□□ -0.19
RPL39P62891 PGM5P4-201ENST00000421970 445 ntBASIC13.85□□□□□ -0.19
RPL39P62891 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.85□□□□□ -0.19
RPL39P62891 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.85□□□□□ -0.19
RPL39P62891 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RPL39P62891 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL39P62891 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RPL39P62891 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.84□□□□□ -0.19
RPL39P62891 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.84□□□□□ -0.19
RPL39P62891 CDV3P1-201ENST00000471403 739 ntBASIC13.84□□□□□ -0.19
RPL39P62891 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.84□□□□□ -0.19
RPL39P62891 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.84□□□□□ -0.19
RPL39P62891 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
RPL39P62891 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.84□□□□□ -0.19
RPL39P62891 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RPL39P62891 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms