Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB1AP62820 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB1AP62820 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 KRT18P29-201ENST00000397031 1267 ntBASIC17.24■□□□□ 0.35
RAB1AP62820 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB1AP62820 AC128676.1-201ENST00000454392 318 ntBASIC17.24■□□□□ 0.35
RAB1AP62820 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 PRKY-204ENST00000533551 1019 ntBASIC17.24■□□□□ 0.35
RAB1AP62820 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB1AP62820 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB1AP62820 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB1AP62820 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB1AP62820 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 AC073648.6-201ENST00000641589 218 ntBASIC17.24■□□□□ 0.35
RAB1AP62820 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB1AP62820 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAB1AP62820 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB1AP62820 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB1AP62820 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.24■□□□□ 0.35
RAB1AP62820 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RAB1AP62820 TFP1-202ENST00000475455 1573 ntBASIC17.23■□□□□ 0.35
RAB1AP62820 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB1AP62820 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB1AP62820 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB1AP62820 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB1AP62820 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB1AP62820 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB1AP62820 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB1AP62820 AC009237.14-201ENST00000609975 1594 ntBASIC17.23■□□□□ 0.35
RAB1AP62820 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB1AP62820 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB1AP62820 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RAB1AP62820 TMEM179-206ENST00000616017 1645 ntBASIC17.22■□□□□ 0.35
RAB1AP62820 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB1AP62820 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RAB1AP62820 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 AC233263.1-201ENST00000578059 224 ntBASIC17.22■□□□□ 0.35
RAB1AP62820 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 ITM2C-210ENST00000620962 501 ntBASIC17.22■□□□□ 0.35
RAB1AP62820 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
RAB1AP62820 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB1AP62820 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB1AP62820 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB1AP62820 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB1AP62820 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB1AP62820 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB1AP62820 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 ABHD17AP1-201ENST00000358206 933 ntBASIC17.21■□□□□ 0.35
RAB1AP62820 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB1AP62820 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RAB1AP62820 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB1AP62820 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB1AP62820 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB1AP62820 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms