Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.94■□□□□ 0.46
CDC42P60953 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 PTBP1P-201ENST00000554374 1601 ntBASIC17.94■□□□□ 0.46
CDC42P60953 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.94■□□□□ 0.46
CDC42P60953 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDC42P60953 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC42P60953 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC42P60953 AC110285.6-201ENST00000617652 491 ntBASIC17.93■□□□□ 0.46
CDC42P60953 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.93■□□□□ 0.46
CDC42P60953 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC42P60953 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC42P60953 AC019069.1-201ENST00000610008 1333 ntBASIC17.93■□□□□ 0.46
CDC42P60953 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC42P60953 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDC42P60953 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CDC42P60953 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CDC42P60953 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.92■□□□□ 0.46
CDC42P60953 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.92■□□□□ 0.46
CDC42P60953 AC027612.3-201ENST00000413684 1047 ntBASIC17.92■□□□□ 0.46
CDC42P60953 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC42P60953 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.92■□□□□ 0.46
CDC42P60953 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC42P60953 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.92■□□□□ 0.46
CDC42P60953 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.92■□□□□ 0.46
CDC42P60953 AL031963.3-201ENST00000606441 850 ntBASIC17.92■□□□□ 0.46
CDC42P60953 AL031432.3-201ENST00000607698 485 ntBASIC17.92■□□□□ 0.46
CDC42P60953 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.92■□□□□ 0.46
CDC42P60953 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDC42P60953 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC42P60953 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC42P60953 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.91■□□□□ 0.46
CDC42P60953 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CDC42P60953 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC42P60953 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.91■□□□□ 0.46
CDC42P60953 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC42P60953 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CDC42P60953 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC42P60953 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.91■□□□□ 0.46
CDC42P60953 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.91■□□□□ 0.46
CDC42P60953 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC42P60953 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CDC42P60953 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDC42P60953 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.91■□□□□ 0.46
CDC42P60953 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC42P60953 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDC42P60953 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CDC42P60953 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC42P60953 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC42P60953 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC42P60953 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDC42P60953 KRT8P20-201ENST00000423953 1409 ntBASIC17.9■□□□□ 0.46
CDC42P60953 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC42P60953 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC42P60953 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms