Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.24■□□□□ 0.83
EIF3EP60228 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 SLC29A4P1-201ENST00000398760 971 ntBASIC20.24■□□□□ 0.83
EIF3EP60228 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.24■□□□□ 0.83
EIF3EP60228 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.24■□□□□ 0.83
EIF3EP60228 GUSBP6-202ENST00000438529 1198 ntBASIC20.24■□□□□ 0.83
EIF3EP60228 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 AC091874.3-201ENST00000512672 1195 ntBASIC20.24■□□□□ 0.83
EIF3EP60228 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.24■□□□□ 0.83
EIF3EP60228 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.24■□□□□ 0.83
EIF3EP60228 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
EIF3EP60228 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3EP60228 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
EIF3EP60228 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3EP60228 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
EIF3EP60228 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3EP60228 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3EP60228 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3EP60228 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3EP60228 AC073210.2-201ENST00000430369 194 ntBASIC20.23■□□□□ 0.83
EIF3EP60228 NCF1B-203ENST00000435988 1254 ntBASIC20.23■□□□□ 0.83
EIF3EP60228 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
EIF3EP60228 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.23■□□□□ 0.83
EIF3EP60228 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.23■□□□□ 0.83
EIF3EP60228 BX323043.1-201ENST00000641006 1765 ntBASIC20.23■□□□□ 0.83
EIF3EP60228 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.23■□□□□ 0.83
EIF3EP60228 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3EP60228 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3EP60228 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.22■□□□□ 0.83
EIF3EP60228 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3EP60228 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
EIF3EP60228 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.22■□□□□ 0.83
EIF3EP60228 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3EP60228 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3EP60228 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.22■□□□□ 0.83
EIF3EP60228 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.22■□□□□ 0.83
EIF3EP60228 TSPY6P-201ENST00000448518 926 ntBASIC20.22■□□□□ 0.83
EIF3EP60228 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.22■□□□□ 0.83
EIF3EP60228 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3EP60228 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.22■□□□□ 0.83
EIF3EP60228 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.22■□□□□ 0.83
EIF3EP60228 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.22■□□□□ 0.83
EIF3EP60228 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
EIF3EP60228 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.22■□□□□ 0.83
EIF3EP60228 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
EIF3EP60228 AC006557.6-201ENST00000623071 864 ntBASIC20.22■□□□□ 0.83
EIF3EP60228 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3EP60228 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
EIF3EP60228 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3EP60228 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.22■□□□□ 0.83
EIF3EP60228 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3EP60228 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.22■□□□□ 0.83
EIF3EP60228 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
EIF3EP60228 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
EIF3EP60228 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
EIF3EP60228 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.21■□□□□ 0.83
EIF3EP60228 TFP1-202ENST00000475455 1573 ntBASIC20.21■□□□□ 0.83
EIF3EP60228 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 AC098818.2-201ENST00000564925 2320 ntBASIC20.21■□□□□ 0.83
EIF3EP60228 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
EIF3EP60228 AL032819.2-201ENST00000624543 2162 ntBASIC20.21■□□□□ 0.83
EIF3EP60228 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
EIF3EP60228 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.21■□□□□ 0.83
EIF3EP60228 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.21■□□□□ 0.83
EIF3EP60228 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.21■□□□□ 0.83
EIF3EP60228 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.21■□□□□ 0.83
EIF3EP60228 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.21■□□□□ 0.83
EIF3EP60228 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms