Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDH4P55283 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH4P55283 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH4P55283 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH4P55283 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.11■□□□□ 0.81
CDH4P55283 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH4P55283 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.11■□□□□ 0.81
CDH4P55283 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.11■□□□□ 0.81
CDH4P55283 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH4P55283 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH4P55283 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH4P55283 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH4P55283 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDH4P55283 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.1■□□□□ 0.81
CDH4P55283 AF186192.3-201ENST00000583427 947 ntBASIC20.1■□□□□ 0.81
CDH4P55283 AL353708.3-201ENST00000610272 989 ntBASIC20.1■□□□□ 0.81
CDH4P55283 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH4P55283 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH4P55283 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CDH4P55283 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH4P55283 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
CDH4P55283 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH4P55283 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH4P55283 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDH4P55283 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH4P55283 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH4P55283 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 AP002982.1-201ENST00000492365 877 ntBASIC20.09■□□□□ 0.81
CDH4P55283 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDH4P55283 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.09■□□□□ 0.81
CDH4P55283 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH4P55283 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CDH4P55283 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
CDH4P55283 KRT8P8-201ENST00000434750 1448 ntBASIC20.09■□□□□ 0.81
CDH4P55283 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CDH4P55283 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH4P55283 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.08■□□□□ 0.81
CDH4P55283 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDH4P55283 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH4P55283 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CDH4P55283 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH4P55283 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH4P55283 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH4P55283 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH4P55283 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.08■□□□□ 0.81
CDH4P55283 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.08■□□□□ 0.81
CDH4P55283 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH4P55283 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.08■□□□□ 0.81
CDH4P55283 AL049637.2-201ENST00000641778 930 ntBASIC20.08■□□□□ 0.81
CDH4P55283 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH4P55283 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH4P55283 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH4P55283 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH4P55283 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH4P55283 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH4P55283 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH4P55283 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CDH4P55283 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH4P55283 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH4P55283 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH4P55283 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH4P55283 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH4P55283 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH4P55283 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH4P55283 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms